The Department of Information Technologies (IT) is part of the Division of Natural Sciences and Technology at Åbo Akademi University. The IT Department provides education in Computer Science, Computer Engineering and Information Systems, at the bachelors level, masters level and postgradual level. The research and education is performed in cooperation with Turku Centre for Computer Science (TUCS).
The Computational Biomodeling Laboratory received funding from Tekes through its Challenge Finland competition. The project is led by Dr. Eugen Czeizler and it is titled "Network pharmacology: drug re-purposing and discovery of multi-drug therapies by analytical approaches (NetPharma)".
Department of Information Technologies at Åbo Akademi University was feeling proud.
The Computational Biomodeling Laboratory (Combio) at our department received the Best Paper Award at the 14th International Conference on Computational Methods in Systems Biology (CMSB) for the article
Eugen Czeizler, Cristian Gratie, Wu Kai Chiu, Krishna Kanhaiya and Ion Petre - Target Controllability of Linear Networks
CMSB is the premiere conference on the computational methodological part of the systems biology research community.
The award comes with a great NVIDIA Tesla K40 GPU card.
It is the second time in a few years when the Combio team receives the best paper award at CMSB!
QS World University Rankings® 2014/15
Åbo Akademi University was ranked highest in Finland for its international student ratio !
New project: the Computational Biomodeling Laboratory received funding on "Network pharmacology: drug re-purposing and discovery of multi-drug therapies by analytical approaches". The project's PI is Dr. Eugen Czeizler. This line of research builds on the lab's recent results for network controlability algorithmics and aims to bring them closer to the comercial arena. The project is funded by TEKES through its "Challenge Finland" competition.
Saving Nemo in Kaapelitehdas.
|Anier, Aivo and Vain, Jüri and Tsiopoulos, Leonidas, DTRON: A Tool for Distributed Model-Based Testing of Time Critical Applications. In: Proceedings of the Estonian Academy of Sciences. 2017 1|
|Ashraf, Adnan and Porres, Ivan, Multi-Objective Dynamic Virtual Machine Consolidation in the Cloud Using Ant Colony System. In: International Journal of Parallel, Emergent and Distributed Systems. Taylor & Francis, 2017 1|
|Panchal, Charmi and Rogojin, Vladimir, Generating the Logicome from Microarray Data. TUCS Technical Reports 1175. 2017|
|Mattila, Keijo and Puurtinen, Tuomas and Hyväluoma, Jari and Surmas, Rodrigo and Myllys, Markko and Turpeinen, Tuomas and Robertsén, Fredrik and Westerholm, Jan and Timonen, Jussi, A Prospect for Computing in Porous Materials Research: Very Large Fluid Flow Simulations. In: Journal of Computational Science. 2016 1|
|Iqbal, Junaid and Tsiopoulos, Leonidas and Truscan, Dragos and Vain, Jüri and Porres, Ivan, The Crisis Management System – A Case Study in Aspect-Oriented Modeling Using UPPAAL. TUCS Technical Reports 1169. Turku Centre for Computer Science, 2016|
|Sheme, Enida and Frashëri, Neki and Holmbacka, Simon and Lafond, Sébastien and Luzanin, Drazen, Datacenters powered by renewable energy: A case study for 60 degrees latitude north. In: 24th International Conference on Software, Telecommunications and Computer Networks (SoftCOM). Prvan, Marina (Eds.). IEEE Communications Society, 2016|
|Kovriguina, Liubov and Shipilo, Alexander and Kozlov, Fedor and Kolchin, Maxim and Cherny, Eugene, Metadata Extraction from Conference Proceedings Using Template-Based Approach. In: Second SemWebEval Challenge at ESWC 2015, Portorož, Slovenia, May 31 - June 4, 2015, Revised Selected Papers. Gandon, Fabien and Cabrio, Elena and Stankovic, Milan and Zimmermann, Antoine (Eds.). Communications in Computer and Information Science Springer, 2016|
|Czeizler, Eugen and Gratie, Cristian and Chiu, Wu Kai and Kanhaiya, Krishna and Petre, Ion, Target Controllability of Linear Networks. In: Computational Methods in Systems Biology. Bartocci, Ezio and Lio, Pietro and Paoletti, Nicola (Eds.). Lecture Notes in Bioinformatics Springer, 2016 1|
|Ahmad, Tanwir and Truscan, Dragos, Automatic Performance Space Exploration of Web Applications using Genetic Algorithms. In: The 31st ACM Symposium on Applied Computing. Ossowski, Sascha and Buttazzo, Giorgio and Kim, John (Eds.). ACM, 2016 1|
|Ashraf, Adnan and Byholm, Benjamin and Porres, Ivan, Distributed Virtual Machine Consolidation: A Systematic Mapping Study. TUCS Technical Reports 1171. TUCS, 2016|
|Nybom, Kristian and Smeds, Jens and Porres, Ivan, On the Impact of Mixing Responsibilities Between Devs and Ops. In: Agile Processes, in Software Engineering, and Extreme Programming: 17th International Conference, XP 2016. Sharp, Helen and Hall, Tracy (Eds.). Springer International Publishing, 2016|
|Olszewska, Marta and Ostroumov, Sergey and Waldén, Marina, Using Scrum to Develop a Formal Model – An Experience Report. In: Product-Focused Software Process Improvement: 17th International Conference, PROFES 2016, Trondheim, Norway, November 22-24, 2016. Abrahamsson, Pekka and Jedlitschka, Andreas and Nguyen Duc, Anh and Felderer, Michael and Amasaki, Sousuke and Mikkonen, Tommi (Eds.). LNCS Springer International Publishing, 2016 1|
|Panchal, Charmi and Azimi, Sepinoud and Petre, Ion, Generating the Logicome of a Biological Network. In: Algorithms for Computational Biology. Botón-Fernández María, and Martín-Vide Carlos, and Santander-Jiménez Sergio, and Vega-Rodríguez, Miguel A. (Eds.). Lecture Notes in Bioinformatics (Subseries of Lecture Notes in Computer Science) Springer, 2016|
|Azimi, Sepinoud and Panchal, Charmi and Mizera, Andrzej and Petre, Ion, Multi-Stability, Limit Cycles, and Period-Doubling Bifurcation with Reaction Systems. TUCS Technical Reports 1167. TUCS, 2016|
|Rauf, Irum and Perälä, Pekka and Huotari, Jouni and Porres, Ivan, Perceived Obstacles by Novice Developers Adopting User Interface APIs and Tools. In: 2016 IEEE Symposium on Visual Languages and Human-Centric Computing, VL/HCC 2016. Blackwell, Alan and Plimmer, Beryl and Stapleton, Gem (Eds.). IEEE, 2016 1|